| Name | Version | Summary | date |
| deep-genomics |
2025.8.15 |
Deep learning utilities for genomics |
2025-08-18 17:40:47 |
| clairvoyance-feature-selection |
2025.8.13 |
AutoML simultaneous bayesian hyperparameter optimization and feature selection |
2025-08-13 21:52:28 |
| skclust |
2025.8.12.post1 |
A comprehensive clustering toolkit with advanced tree cutting and visualization |
2025-08-13 02:33:16 |
| leviathan |
2025.7.21 |
Genome-resolved taxonomic and pathway profiling |
2025-07-21 17:36:30 |
| niche-space |
2025.7.10 |
Hierarchical niche space analysis in python |
2025-07-10 21:18:27 |
| ensemble-networkx |
2025.7.8 |
Ensemble networks in Python |
2025-07-09 04:40:28 |
| pyexeggutor |
2025.2.6 |
Run shell commands in Python |
2025-02-06 19:41:09 |
| pyhmmsearch |
2025.1.23 |
Fast implementation of HMMSEARCH optimized for high-memory systems using PyHmmer |
2025-01-24 21:38:44 |
| pykofamsearch |
2024.11.8.post1 |
Fast implementation of KofamScan optimized for high-memory systems using PyHmmer |
2024-11-08 17:36:45 |
| kegg-pathway-profiler |
2024.10.16 |
KEGG Pathway Profiler |
2024-10-16 21:28:21 |
| leviathan-profiler |
0a0 |
Genome-resolved taxonomic and pathway profiling |
2024-09-27 19:57:57 |
| rule-evaluator |
2024.8.14.post1 |
Lightweight Python-based nested rule evaluator |
2024-08-14 19:08:20 |
| metabolic-niche-space |
2024.7.10.post1 |
Metabolic niche space analysis |
2024-07-10 21:24:40 |
| soothsayer |
2024.2.27 |
High-level package for (bio-)informatics |
2024-02-27 17:22:08 |
| fastq-preprocessor |
2023.12.12 |
Fast short read fastq preprocessor with optional contamination removal |
2023-12-12 08:21:23 |
| hive-networkx |
2023.8.22 |
Hive plots in Python |
2023-10-03 23:09:59 |
| compositional |
2023.8.28 |
Compositional data analysis in Python |
2023-08-28 18:55:42 |
| genopype |
2023.5.15 |
Architecture for building creating pipelines |
2023-05-16 05:43:16 |
| hierarchical-ensemble-classifier |
2023.4.18a0 |
Customizable Scikit-Learn compatible hierarchical ensemble of classifiers models |
2023-04-19 03:53:18 |
| soothsayer-utils |
2022.6.24 |
Utility functions for Soothsayer |
2022-09-01 01:45:03 |
Josh L. Espinoza